ZFIN ID: ZDB-GENE-041114-79
Gene Name: PCI domain containing 2
Gene Symbol: pcid2
Sequence Ontology ID : SO:0000704

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Previous Names: fa11f03, ik:tdsubc_1e10 (1), im:6909928 (1), tdsubc_1e10, wu:fa11f03 (1), xx:tdsubc_1e10, zgc:101845

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6909928]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
zko6a Small Deletion Unknown Unknown CRISPR
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pcid2 HUMAN ORTHOLOG No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process nuclear retention of pre-mRNA at the site of transcription (more)
Cellular Component COLOCALIZES_WITH nuclear pore (more)
Molecular Function RNA binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000717 (1)
  • InterPro:IPR036388 (1)
  • PROSITE:PS50250 (1)
  • Pfam:PF01399 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA pcid2-001 (1) 1644
    ncRNA pcid2-002 (1) 940
    pcid2-003 (1) 417
    pcid2-004 (1) 660
    pcid2-005 (1) 283
    pcid2-006 (1) 276
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM pcid2 No data available
    MARKER RELATIONSHIPS
    pcid2Contained in: [Fosmid] ZFOS-1608A7 (1), ZFOS-1962A1 (1)
    pcid2Encodes: [EST] fa11f03, IMAGE:6909928 (1) (order this), tdsubc_1e10
    [cDNA] MGC:101845 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007381 (1)
    Genomic GenBank:FP017167 (1) 39043bp
    Select Tool
    Polypeptide UniProtKB:F1QPP5 (1) 399aa
    Sequence Clusters UniGene:75241 (1)
    Sequence Information (all 20)
    OTHER pcid2 GENE PAGES
  • Alliance (1)
  • Gene:492509 (1)
  • VEGA:OTTDARG00000033601 (1)
  • Ensembl(GRCz10):ENSDARG00000013802 (1)
  • ORTHOLOGY for pcid2 (Chr: 1)
    CITATIONS (17)