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ZIRC
ZFIN ID: ZDB-GENE-041114-62
Gene Name: SLU7 homolog, splicing factor
Gene Symbol: slu7
Sequence Ontology ID : SO:0000704

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Previous Names: fc94e11, wu:fc94e11, zgc:103640

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(Including Attributions)
Location: Chr: 14 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to second spliceosomal transesterification activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to localize to the spliceosomal complex. Orthologous  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6909561]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa22543 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35757 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slu7 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH slu7 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process mRNA processing (more)
    Cellular Component cytoplasm (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR021715 (1)
  • InterPro:IPR039974 (1)
  • Pfam:PF11708 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA slu7-201 (1) 552
    slu7-202 (1) 2551
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM slu7 No data available
    MARKER RELATIONSHIPS
    slu7Contained in: [BAC] CH211-235E9 (1) (order this)
    slu7Encodes: [EST] fc94e11, IMAGE:6909561 (1) (order this)
    [cDNA] MGC:103640 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007367 (1) 1868bp
    Genomic GenBank:AL929007 (1) 187464bp
    Select Tool
    Polypeptide UniProtKB:F1RCR0 (1) 619aa
    Sequence Clusters UniGene:3350 (1)
    Sequence Information (all 17)
    ORTHOLOGY for slu7 (Chr: 14)
    CITATIONS (22)