ZFIN ID: ZDB-GENE-041114-193
Gene Name: C2 calcium dependent domain containing 5
Gene Symbol: c2cd5    Nomenclature History

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Previous Names: fj43c12, si:ch1073-429g16.1, si:ch73-30n17.4, wu:fj43c12 (1), zgc:63659, zgc:92130

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 18 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity and calcium-dependent phospholipid binding activity. Predicted to be involved in intracellular protein transmembrane transport; positive regulation of transport; and protein localization to plasma membrane. Predicted to localize to plasma membrane. Orthologous to human C2CD5 (C2 calcium dependent domain containing 5).
Genome Resources: Alliance (1),  Gene:393585 (1),  Ensembl(GRCz11):ENSDARG00000094590 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:63659]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa16539 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH c2cd5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH c2cd5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intracellular protein transmembrane transport (more)
    Cellular Component plasma membrane (more)
    Molecular Function calcium-dependent phospholipid binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA c2cd5-001 (1) 2557
    c2cd5-003 (1) 1922
    c2cd5-201 (1)    Ensembl 2095
    c2cd5-202 (1)    Ensembl 490
    c2cd5-204 (1)    Ensembl 1204
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM c2cd5 No data available
    MARKER RELATIONSHIPS
    c2cd5 Contained in: [BAC] CH73-30N17 (1)
    [Fosmid] CH1073-380L12 (1), CH1073-429G16 (1)
    c2cd5 Encodes: [EST] fj43c12
    [cDNA] MGC:63659 (1), MGC:92130 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_200613 (1) 3108 nt
    Genomic GenBank:CU499387 (1) 82259 nt
    Select Tool
    Polypeptide UniProtKB:B8JLR9 (1) 1072 aa
    Sequence Information (all 76)
    ORTHOLOGY for c2cd5 ( Chr: 18 )
    CITATIONS (20)