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ZIRC
ZFIN ID: ZDB-GENE-041114-189
Gene Name: gem (nuclear organelle) associated protein 8
Gene Symbol: gemin8    Nomenclature History

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Previous Names: wu:fd13g07, zgc:92177

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to be involved in spliceosomal snRNP assembly. Predicted to localize to the SMN complex and SMN-Sm protein complex. Orthologous to human GEMIN8 (gem nuclear organelle associated protein 8).
Genome Resources: Alliance (1),  Gene:100000842 (1),  Ensembl(GRCz11):ENSDARG00000053496 (1)
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hg112 Insertion Unknown Unknown CRISPR
sa31207 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH gemin8 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH gemin8 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process spliceosomal snRNP assembly (more)
    Cellular Component SMN complex (more)
    Molecular Function molecular_function (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR034754 (1)
  • Pfam:PF15348 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA gemin8-201 (1)    Ensembl 1461
    gemin8-202 (1)    Ensembl 913
    ncRNA gemin8-004 (1)    Ensembl 895
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM gemin8 No data available
    MARKER RELATIONSHIPS
    gemin8 Contained in: [BAC] CH211-237A6 (1) (order this)
    gemin8 Encodes: [EST] fd13g07
    [cDNA] MGC:92177 (1) (order this), MGC:158850 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007317 (1) 1560 bp
    Genomic RefSeq:NW_018394488 (1) Blast at MegaBLAST
    Polypeptide UniProtKB:A1L2E8 (1) 217 aa
    Sequence Clusters UniGene:79749 (1)
    Sequence Information (all 22)
    ORTHOLOGY for gemin8 ( Chr: 1 )
    CITATIONS (18)