ZFIN ID: ZDB-GENE-041114-188
Gene Name: sphingosine-1-phosphate receptor 5a
Gene Symbol: s1pr5a    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: fd11a07, wu:fd11a07, zgc:92296

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to localize to cytoplasm and plasma membrane. Is expressed in brain; eye; heart; pleuroperitoneal region; and somite. Orthologous to human S1PR5 (sphingosine-1-phosphate receptor 5).
Genome Resources: Alliance (1),  Gene:492350 (1),  Ensembl(GRCz11):ENSDARG00000040526 (2)
GENE EXPRESSION
All Expression Data: 4 figures from 4 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ko355 Small Deletion Unknown Unknown TALEN
sa2091 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-s1pr5a N/A 1
    TALEN1-s1pr5a 3
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH s1pr5a HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH s1pr5a VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process G protein-coupled receptor signaling pathway (more)
    Cellular Component integral component of membrane (more)
    Molecular Function G protein-coupled receptor activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA s1pr5a-201 (1)    Ensembl 2443
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM s1pr5a No data available
    MARKER RELATIONSHIPS
    s1pr5a Contained in: [BAC] DKEYP-109A10 (1)
    s1pr5a Contains: [SNP] rs3727694 (1)
    s1pr5a Encodes: [EST] fd11a07
    [cDNA] MGC:92296 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001007316 (1) 2459 nt
    Genomic GenBank:CU855822 (1) 59084 nt
    Select Tool
    Polypeptide UniProtKB:F1Q7W7 (1) 399 aa
    Sequence Information (all 13)
    ORTHOLOGY for s1pr5a ( Chr: 3 )
    CITATIONS (29)