ZFIN ID: ZDB-GENE-041114-160
Gene Name: NSFL1 (p97) cofactor (p47)
Gene Symbol: nsfl1c    Nomenclature History

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Previous Names: hm:zehn2383, wu:fc88f08, zehn2383, zgc:101636

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Predicted to have ubiquitin binding activity. Predicted to be involved in several processes, including Golgi organization; autophagosome assembly; and proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to localize to cytosol and nucleus. Orthologous to human NSFL1C (NSFL1 cofactor).
Genome Resources: Alliance (1),  Gene:492805 (1),  Ensembl(GRCz11):ENSDARG00000087640 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6904990]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH nsfl1c HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH nsfl1c VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process autophagosome assembly (more)
Cellular Component cytosol (more)
Molecular Function ubiquitin binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA nsfl1c-201 (1)    Ensembl 2279
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM nsfl1c No data available
MARKER RELATIONSHIPS
nsfl1c Contained in: [BAC] CH211-209J10 (1)
nsfl1c Encodes: [EST] fc88f08, IMAGE:6904990 (1), zehn2383
[cDNA] MGC:101636 (1), MGC:191641 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001007446 (1) 1881 nt
Genomic GenBank:CR847953 (1) 220410 nt Blast at MegaBLAST
Polypeptide UniProtKB:F1Q8D2 (1) 372 aa
Sequence Information (all 24)
ORTHOLOGY for nsfl1c ( Chr: 23 )
CITATIONS (19)