ZFIN ID: ZDB-GENE-041114-12
Gene Name: tRNA methyltransferase 10C, mitochondrial RNase P subunit
Gene Symbol: trmt10c    Nomenclature History

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Previous Names: rg9mtd1, wu:fb53e06, zgc:103570 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Predicted to have tRNA (guanine-N1-)-methyltransferase activity and tRNA binding activity. Predicted to be involved in mitochondrial tRNA processing. Predicted to localize to mitochondrial ribonuclease P complex and nucleoplasm. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 30. Orthologous to human TRMT10C (tRNA methyltransferase 10C, mitochondrial RNase P subunit).
Genome Resources: Alliance (1),  Gene:492460 (1),  Ensembl(GRCz11):ENSDARG00000041575 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:103570]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1936 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa5931 Point Mutation Unknown Premature Stop ENU
    zko22a Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-trmt10c 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH trmt10c HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    combined oxidative phosphorylation deficiency 30 Alliance Combined oxidative phosphorylation deficiency 30 616974
    DISEASE ASSOCIATED WITH trmt10c VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process tRNA processing (more)
    Cellular Component mitochondrion (more)
    Molecular Function tRNA binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA trmt10c-202 (1)    Ensembl 1683
    trmt10c-203 (1)    Ensembl 1139
    ncRNA trmt10c-003 (1)    Ensembl 538
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM trmt10c No data available
    MARKER RELATIONSHIPS
    trmt10c Contained in: [BAC] CH73-41E3 (1)
    trmt10c Encodes: [EST] fb53e06
    [cDNA] MGC:103570 (1)
    trmt10c Has Artifact: [EST] fb23g02 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001007332 (1) 1154 nt
    Genomic GenBank:CU571081 (1) 130071 nt
    Select Tool
    Polypeptide UniProtKB:B8JM40 (1) 403 aa
    Sequence Information (all 12)
    ORTHOLOGY for trmt10c ( Chr: 1 )
    CITATIONS (22)