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ZIRC
ZFIN ID: ZDB-GENE-041114-119
Gene Name: protein O-mannose kinase
Gene Symbol: pomk    Nomenclature History

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Previous Names: wu:fc58e12, zgc:101572

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 13 Mapping Details/Browsers
Description: Exhibits ADP binding activity; kinase activity; and polysaccharide binding activity. Involved in muscle structure development and swimming. Predicted to localize to the endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital muscular dystrophy-dystroglycanopathy type A12 and limb-girdle muscular dystrophy. Orthologous to human POMK (protein O-mannose kinase).
Genome Resources: Alliance (1),  Gene:492773 (1),  Ensembl(GRCz11):ENSDARG00000003208 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7152802]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1372 Point Mutation Unknown Premature Stop ENU
Sequence Targeting Reagents
Targeting Reagent Created Alleles Publications
MO1-pomk N/A 1
MO2-pomk N/A 1
DISEASE ASSOCIATED WITH pomk HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
congenital muscular dystrophy-dystroglycanopathy type A12 Alliance Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 12 615249
muscular dystrophy-dystroglycanopathy Alliance ?Muscular dystrophy-dystroglycanopathy (limb-girdle), type C, 12 616094
DISEASE ASSOCIATED WITH pomk VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process muscle structure development (more)
Cellular Component endoplasmic reticulum (more)
Molecular Function ADP binding (more)
GO Terms (all 19)
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA pomk-201 (1)    Ensembl 4584
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM pomk No data available
MARKER RELATIONSHIPS
pomk Contained in: [BAC] DKEY-19P15 (1) (order this)
pomk Encodes: [EST] fc58e12, IMAGE:7152802 (1) (order this)
[cDNA] MGC:101572 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001007414 (1) 1595 bp
Genomic GenBank:CR848040 (1) 146215 bp
Select Tool
Polypeptide UniProtKB:Q5U3W1 (1) 347 aa
Sequence Clusters UniGene:3907 (1)
Sequence Information (all 13)
ORTHOLOGY for pomk ( Chr: 13 )
CITATIONS (22)