ZFIN ID: ZDB-GENE-041114-114
Gene Name: YTH domain containing 1
Gene Symbol: ythdc1    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:101592 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have RNA binding activity. Orthologous to human YTHDC1 (YTH domain containing 1).
Genome Resources: Alliance (1),  Gene:492769 (1),  Ensembl(GRCz11):ENSDARG00000051953 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101592]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
PHENOTYPE No data available
DISEASE ASSOCIATED WITH ythdc1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH ythdc1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process biological_process (more)
Cellular Component cellular_component (more)
Molecular Function RNA binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR007275 YTH domain
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA ythdc1-201 (1)    Ensembl 2578
ncRNA ythdc1-002 (1)    Ensembl 660
ythdc1-003 (1)    Ensembl 674
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM ythdc1 No data available
MARKER RELATIONSHIPS
ythdc1 Contained in: [BAC] DKEY-204E18 (1) (order this)
ythdc1 Encodes: [cDNA] MGC:101592 (1), MGC:192949 (1)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_001007410 (1) 2597 bp
Genomic GenBank:CU571335 (1) 90663 bp
Select Tool
Polypeptide UniProtKB:B8JMA3 (1) 679 aa
Sequence Information (all 17)
ORTHOLOGY for ythdc1 ( Chr: 5 )
CITATIONS (20)