ZFIN ID: ZDB-GENE-041114-11
Gene Name: collectin sub-family member 11
Gene Symbol: colec11    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: wu:fb82e09, zgc:103572

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 17 Mapping Details/Browsers
Description: Predicted to have several functions, including calcium ion binding activity; calcium-dependent carbohydrate binding activity; and monosaccharide binding activity. Involved in neural crest cell migration. Predicted to localize to extracellular space. Is expressed in head; hindbrain; liver; pronephric duct; and pronephric glomerulus. Human ortholog(s) of this gene implicated in 3MC syndrome 2. Orthologous to human COLEC11 (collectin subfamily member 11).
Genome Resources: Alliance (1),  Gene:492459 (1),  Ensembl(GRCz11):ENSDARG00000013266 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020115Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    MO1-colec11 N/A 1
    MO2-colec11 N/A 1
    DISEASE ASSOCIATED WITH colec11 HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    3MC syndrome 2 Alliance 3MC syndrome 2 265050
    DISEASE ASSOCIATED WITH colec11 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process developmental process (more)
    Cellular Component extracellular space (more)
    Molecular Function calcium-dependent carbohydrate binding (more)
    GO Terms (all 18)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA colec11-201 (1)    Ensembl 2760
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM colec11 No data available
    MARKER RELATIONSHIPS
    colec11 Contained in: [BAC] DKEY-25G12 (1) (order this)
    colec11 Encodes: [EST] fb82e09 (1)
    [cDNA] MGC:103572 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001007331 (1) 2763 nt
    Genomic GenBank:BX005484 (1) 212049 nt Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8PZ68 (1) 282 aa
    Sequence Information (all 16)
    ORTHOLOGY for colec11 ( Chr: 17 )
    CITATIONS (23)