ZFIN ID: ZDB-GENE-041114-109
Gene Name: SVOP-like
Gene Symbol: svopl    Nomenclature History

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Previous Name: zgc:101741 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 4 Mapping Details/Browsers
Description: Predicted to have transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to localize to integral component of membrane. Is expressed in hatching gland; myotome; pectoral fin musculature; polster; and somite. Orthologous to human SVOPL (SVOP like).
Genome Resources: Alliance (1),  Gene:492766 (1),  Ensembl(GRCz11):ENSDARG00000057983 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (9 images) from Thisse et al., 2004 [IMAGE:7156329]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Hatching:Long-pec (48.0h-60.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa1011 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa6048 Point Mutation Unknown Premature Stop ENU
    sa18140 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa25275 Point Mutation Unknown Splice Site ENU
    sa33394 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33395 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH svopl HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH svopl VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process transmembrane transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function transmembrane transporter activity (more)
    GO Terms (all 4)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA svopl-201 (1)    Ensembl 2087
    svopl-202 (1)    Ensembl 793
    svopl-203 (1)    Ensembl 892
    svopl-205 (1)    Ensembl 2051
    ncRNA svopl-005 (1)    Ensembl 545
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM svopl No data available
    MARKER RELATIONSHIPS
    svopl Contained in: [BAC] DKEYP-27E10 (1)
    svopl Encodes: [EST] IMAGE:7156329 (1)
    [cDNA] MGC:101741 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001045229 (1) 2091 nt
    Genomic GenBank:BX649444 (1) 85097 nt
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q7R1 (1) 513 aa
    Sequence Information (all 22)
    ORTHOLOGY for svopl ( Chr: 4 )
    CITATIONS (25)