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ZIRC
ZFIN ID: ZDB-GENE-041111-310
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Gene Name: si:ch211-212o1.2
Gene Symbol: si:ch211-212o1.2
Sequence Ontology ID : SO:0000704

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Previous Name: im:7152497

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to localize to the integral component of membrane. Orthologous to human TMEM189-UBE2V1 (TMEM189-UBE2V1 readthrough).

Nomenclature Note: This gene is derived from the zebrafish genome sequencing and annotation project. When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix 'si:' indicates that this gene is represented by annotated genomic sequence from the Sanger Institute.

GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23279 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa32200 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH si:ch211-212o1.2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH si:ch211-212o1.2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component integral component of membrane (more)
    Molecular Function ubiquitin protein ligase activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR019547 (1)
    		•
  • Pfam:PF10520 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA si:ch211-212o1.2-201 (1) 639
    Select Tool
    si:ch211-212o1.2-202 (1) 2249
    Select Tool
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM si:ch211-212o1.2 No data available
    MARKER RELATIONSHIPS
    si:ch211-212o1.2Contained in: [BAC] CH211-212O1 (1) (order this)
    si:ch211-212o1.2Encodes: [EST] IMAGE:7152497 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080164 (1) 2249bp
    Select Tool
    Genomic GenBank:CR387935 (1) 152685bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8RZ48 (1) 324aa
    Select Tool
    Sequence Clusters UniGene:133254 (1)
    Sequence Information (all 20)
    OTHER si:ch211-212o1.2 GENE PAGES
  • Alliance (1)
  • Gene:492735 (1)
  • VEGA:OTTDARG00000017718 (1)
  • Ensembl(GRCz11):ENSDARG00000011498 (1)
    • ORTHOLOGY for si:ch211-212o1.2 (Chr: 18)
    CITATIONS (14)