| ZFIN ID: ZDB-GENE-041111-262 |
| Gene Name: | thyroid hormone receptor interactor 12 | |||||||||||||
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| Gene Symbol: | trip12 Nomenclature History |
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| Previous Names: | im:7149446, si:ch211-272f3.4 (1) | |||||||||||||
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| Gene Type: | protein_coding_gene | |||||||||||||
| Location: | Chr: 18 Mapping Details/Browsers | |||||||||||||
| Description: | Predicted to have ubiquitin-protein transferase activity. Predicted to be involved in several processes, including cellular response to DNA damage stimulus; negative regulation of nitrogen compound metabolic process; and ubiquitin-dependent protein catabolic process. Predicted to localize to the nucleoplasm. Human ortholog(s) of this gene implicated in autosomal dominant mental retardation 49. Is expressed in myotome. Orthologous to human TRIP12 (thyroid hormone receptor interactor 12). | |||||||||||||
| Genome Resources: | Alliance (1), Gene:564866 (1), Ensembl(GRCz11):ENSDARG00000061397 (1) | |||||||||||||
| Directly Submitted Expression Data: | 6 figures (2 images) from Thisse et al., 2004 [IMAGE:7149446] |
| Wild-type Stages, Structures: | Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h) |
| Curated Microarray Expression: | GEO (1) |
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
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| autosomal dominant mental retardation 49 | Alliance | Mental retardation, autosomal dominant 49 | 617752 |
| Ontology | GO Term |
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| Biological Process | cellular response to DNA damage stimulus (more) |
| Cellular Component | nucleoplasm (more) |
| Molecular Function | ubiquitin-protein transferase activity (more) |
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| Type | Name | Length (nt) | Analysis | |
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| mRNA |
trip12-202
(1)
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258 |
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trip12-203
(1)
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6552 |
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| Browsers: UCSC, NCBI, Ensembl, ZFIN |
| trip12 Contained in: | [BAC] CH73-160P19 (1) (order this), CH211-232P17 (1) (order this), CH211-272F3 (1) (order this) |
| trip12 Encodes: | [EST] IMAGE:7149446 (1) (order this) |
| Type | Accession # | Length (bp/aa) | Analysis |
|---|---|---|---|
| RNA | RefSeq:NM_001347668 (1) |
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| Genomic | GenBank:BX255879 | 173755 bp | |
| Polypeptide | UniProtKB:A0A2R8Q6F8 (1) | 2111 aa |
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