ZFIN ID: ZDB-GENE-041111-253
Gene Name: sorting nexin 11
Gene Symbol: snx11    Nomenclature History

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Previous Names: im:7148910 (1), si:dkey-220f10.6 (1), zgc:136459

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to have phosphatidylinositol binding activity. Predicted to be involved in intracellular protein transport. Is expressed in artery; vein; and ventral mesoderm. Orthologous to human SNX11 (sorting nexin 11).
Genome Resources: Alliance (1),  Gene:492678 (1),  Ensembl(GRCz11):ENSDARG00000052522 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 3 figures (4 images) from Thisse et al., 2004 [IMAGE:7148910]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6250 Point Mutation Unknown Splice Site ENU
PHENOTYPE No data available
DISEASE ASSOCIATED WITH snx11 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH snx11 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process intracellular protein transport (more)
Molecular Function phosphatidylinositol binding (more)
GO Terms (all 2)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA snx11-201 (1)    Ensembl 4211
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM snx11 No data available
MARKER RELATIONSHIPS
snx11 Contained in: [BAC] DKEY-220F10 (1) (order this)
snx11 Encodes: [EST] IMAGE:7148910 (1)
[cDNA] MGC:136459 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001044316 (1) 4162 nt
Genomic GenBank:CR926135 (1) 73888 nt
Select Tool
Polypeptide UniProtKB:F1R6M7 (1) 506 aa
Sequence Information (all 16)
ORTHOLOGY for snx11 ( Chr: 12 )
CITATIONS (21)