Gene

atg4da

ID

ZDB-GENE-041111-102

Name

autophagy related 4D, cysteine peptidase a

Symbol

atg4da Nomenclature History

Previous Names

im:7140072 (1)
si:ch211-212h16.5 (1)

Type

protein_coding_gene

Location

Chr: 1 Mapping Details/Browsers

Description

Predicted to have cysteine-type peptidase activity. Involved in cerebellar Purkinje cell differentiation and cerebellar neuron development. Predicted to localize to cytoplasm. Orthologous to human ATG4D (autophagy related 4D cysteine peptidase).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

IMAGE:7140072 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 2 figures from Kyöstilä et al., 2015
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With atg4da Human Ortholog

No data available

Associated With atg4da Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR046792	Peptidase C54, catalytic domain
Family	IPR005078	Peptidase C54
Homologous_superfamily	IPR038765	Papain-like cysteine peptidase superfamily

Domain Details Per Protein

Protein	Length	Papain-like cysteine peptidase superfamily	Peptidase C54	Peptidase C54, catalytic domain
UniProtKB:R4GER2 InterPro	485
UniProtKB:A0A8M9Q0Z1 InterPro	485

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	atg4da-202 (1) Ensembl	Havana	4671 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations