ZFIN ID: ZDB-GENE-041108-2
Gene Name: surfeit 1
Gene Symbol: surf1

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Previous Names: im:6898613, zgc:158646

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Location: Chr: 5 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6898613]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
  unspecified, whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la029083Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents: MO1-surf1 (1), TALEN1-surf1 (1)
    PHENOTYPE
    Data: 7 figures from Baden et al., 2007
    Observed in: apoptotic process, cytochrome-c oxidase activity, digestive tract development, eye (all 17) expand
    DISEASE ASSOCIATED WITH surf1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Charcot-Marie-Tooth disease type 4K Charcot-Marie-Tooth disease, type 4K 616684
    Leigh disease Leigh syndrome, due to COX IV deficiency 256000
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic organ development (more)
    Cellular Component membrane (more)
    Molecular Function cytochrome-c oxidase activity (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002994 (1)
  • PROSITE:PS50895 (1)
  • Pfam:PF02104 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA surf1-001 (1) 1128
    ncRNA surf1-002 (1) 818
    surf1-003 (1) 436
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYSNo data available
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM surf1 No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    surf1Contained in: [BAC] CH73-278C20 (1) (order this), DKEY-226M8 (1) (order this)
    surf1Encodes: [EST] IMAGE:6898613 (1) (order this)
    [cDNA] MGC:158646 (1) (order this), MGC:191437 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001080173 (1) 1044bp
    Genomic GenBank:CR382323 143411bp
    Select Tool
    Polypeptide UniProtKB:A1L248 (1) 309aa
    Sequence Clusters UniGene:82799 (1)
    Sequence Information (all 20)
    OTHER surf1 GENE PAGES
  • Gene:557970 (1)
  • VEGA:OTTDARG00000023244 (1)
  • Ensembl(GRCz10):ENSDARG00000003592 (1)
  • ORTHOLOGY for surf1 (Chr: 5)
    Species Symbol Chromosome Accession # Evidence
    Human SURF1 9
  • Gene:6834
  • OMIM:185620
  • HGNC:11474
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Nucleotide sequence comparison (1)
    Download Curated Orthology
    CITATIONS (22)