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ZIRC
ZFIN ID: ZDB-GENE-041105-7
Gene Name: asporin (LRR class 1)
Gene Symbol: aspn
Sequence Ontology ID : SO:0001217

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Previous Names: aspnl, bgl3, wu:fk08c11, zgc:109936

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity and collagen binding activity. Human ortholog(s) of this gene implicated in ankylosing spondylitis; degenerative disc disease; and osteoarthritis.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (8 images) from Thisse et al., 2004 [MGC:109936]
  7 figures (4 images) from Thisse et al., 2005 [eu237]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37439 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH aspn HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    {Lumbar disc degeneration} 603932
    {Osteoarthritis susceptibility 3} 607850
    DISEASE ASSOCIATED WITH aspn VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Molecular Function calcium ion binding (more)
    GO Terms (all 2)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA aspn-201 (1) 1938
    aspn-202 (1) 1253
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM aspn No data available
    MARKER RELATIONSHIPS
    aspn Contained in: [BAC] DKEY-42I9 (1) (order this)
    aspn Encodes: [EST] eu237 (1), fk08c11 (1)
    [cDNA] MGC:109936 (1) (order this), MGC:191639 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131713 (1) 1983 bp
    Genomic GenBank:BX465868 (1) 222195 bp Blast at MegaBLAST
    Polypeptide UniProtKB:A8BBD1 (1) 370 aa
    Sequence Clusters UniGene:81771 (1)
    Sequence Information (all 32)
    ORTHOLOGY for aspn ( Chr: 22 )
    CITATIONS (27)