ZFIN ID: ZDB-GENE-041105-7
Gene Name: asporin (LRR class 1)
Gene Symbol: aspn
Sequence Ontology ID : SO:0000704

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Previous Names: aspnl, bgl3, wu:fk08c11, zgc:109936

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(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (8 images) from Thisse et al., 2004 [MGC:109936]
  7 figures (4 images) from Thisse et al., 2005 [eu237]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa37439 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH aspn HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    {Lumbar disc degeneration} 603932
    {Osteoarthritis susceptibility 3} 607850
    DISEASE ASSOCIATED WITH aspn VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cytokine-mediated signaling pathway (more)
    Cellular Component extracellular region (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000372 (1)
  • InterPro:IPR001611 (1)
  • InterPro:IPR003591 (1)
  • InterPro:IPR016352 (1)
  • InterPro:IPR028548 (1)
  • InterPro:IPR032675 (1)
  • PROSITE:PS51450 (1)
  • Pfam:PF01462 (1)
  • Pfam:PF13855 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA aspn-001 (1) 1938
    aspn-002 (1) 1253
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM aspn No data available
    MARKER RELATIONSHIPS
    aspnContained in: [BAC] DKEY-42I9 (1) (order this)
    aspnEncodes: [EST] eu237 (1), fk08c11 (1)
    [cDNA] MGC:109936 (1) (order this), MGC:191639 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_131713 (1) 1983bp
    Genomic GenBank:BX465868 (1) 222195bp Blast at MegaBLAST
    Polypeptide UniProtKB:A8BBD1 (1) 370aa
    Sequence Clusters UniGene:81771 (1)
    Sequence Information (all 32)
    OTHER aspn GENE PAGES
  • Alliance (1)
  • Gene:65228 (1)
  • VEGA:OTTDARG00000009239 (1)
  • Ensembl(GRCz11):ENSDARG00000002192 (2)
  • ORTHOLOGY for aspn (Chr: 22)
    CITATIONS (27)