ZFIN ID: ZDB-GENE-041027-2
Gene Name: myosin VAa
Gene Symbol: myo5aa
Sequence Ontology ID : SO:0000704

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Previous Names: myo5a, si:dkey-266j9.1

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from 2 publications
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Larval:Day 4 (96.0h-120.0h)
  anterior lateral line placode, forebrain, intestine, midbrain (all 12) expand
PHENOTYPE No data available
DISEASE ASSOCIATED WITH myo5aa HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Griscelli syndrome type 1 Griscelli syndrome, type 1 214450
GENE ONTOLOGY
Ontology GO Term
Cellular Component myosin complex (more)
Molecular Function ATP binding (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000048 (1)
  • InterPro:IPR001609 (1)
  • InterPro:IPR002710 (1)
  • InterPro:IPR008989 (1)
  • InterPro:IPR027401 (1)
  • InterPro:IPR027417 (1)
  • PROSITE:PS50096 (1)
  • PROSITE:PS51126 (1)
  • PROSITE:PS51456 (1)
  • Pfam:PF00063 (1)
  • Pfam:PF00612 (1)
  • Pfam:PF01843 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA myo5aa-001 (1) 5535
    myo5aa-003 (1) 5735
    myo5aa-004 (1) 844
    ncRNA myo5aa-005 (1) 815
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM myo5aa No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    myo5aaContained in: [BAC] CH211-143E19 (1) (order this), DKEY-266J9 (1) (order this)
    myo5aaEncodes: [cDNA] MGC:195213 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009293796 (1) 6121bp
    Genomic GenBank:BX936456 (1) 173079bp
    Select Tool
    Polypeptide UniProtKB:B3DJR2 (1) 1891aa
    Sequence Clusters UniGene:119166 (1)
    Sequence Information (all 35)
    OTHER myo5aa GENE PAGES
  • Gene:562188 (1)
  • VEGA:OTTDARG00000013398 (1)
  • Ensembl(GRCz10):ENSDARG00000061635 (1)
  • ORTHOLOGY for myo5aa (Chr: 18)
    CITATIONS (23)