ZFIN ID: ZDB-GENE-041027-2
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Gene Name: myosin VAa
Gene Symbol: myo5aa
Sequence Ontology ID : SO:0000704

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Previous Names: myo5a, si:dkey-266j9.1

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(Including Attributions)
Location: Chr: 18 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 4 figures from 2 publications
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Larval:Day 4 (96.0h-120.0h)
  anterior lateral line placode, forebrain, intestine, midbrain (all 12) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la020430Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa23354 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
    • sa23355 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
    • sa36702 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • European Zebrafish Resource Center (EZRC) (order this)
    • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH myo5aa HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Griscelli syndrome type 1 Griscelli syndrome, type 1 214450
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component myosin complex (more)
    Molecular Function ATP binding (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000048 (1)
  • InterPro:IPR001609 (1)
  • InterPro:IPR002710 (1)
  • InterPro:IPR008989 (1)
  • InterPro:IPR027401 (1)
  • InterPro:IPR027417 (1)
    		•
  • PROSITE:PS50096 (1)
  • PROSITE:PS51126 (1)
  • PROSITE:PS51456 (1)
    		•
  • Pfam:PF00063 (1)
  • Pfam:PF00612 (1)
  • Pfam:PF01843 (1)
    		•
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA myo5aa-001 (1) 5535
    Select Tool
    myo5aa-003 (1) 5735
    Select Tool
    myo5aa-004 (1) 844
    Select Tool
    ncRNA myo5aa-005 (1) 815
    Select Tool
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM myo5aa No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    myo5aaContained in: [BAC] CH211-143E19 (1) (order this), DKEY-266J9 (1) (order this)
    myo5aaEncodes: [cDNA] MGC:195213 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009293796 (1) 6121bp
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    Genomic GenBank:BX936456 (1) 173079bp
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    Polypeptide UniProtKB:B3DJR2 (1) 1891aa
    Select Tool
    Sequence Clusters UniGene:119166 (1)
    Sequence Information (all 35)
    OTHER myo5aa GENE PAGES
  • Gene:562188 (1)
  • VEGA:OTTDARG00000013398 (1)
  • Ensembl(GRCz10):ENSDARG00000061635 (1)
    • ORTHOLOGY for myo5aa (Chr: 18)
    CITATIONS (23)