ZFIN ID: ZDB-GENE-041015-373
Gene Name: SWT1 RNA endoribonuclease homolog
Gene Symbol: swt1    Nomenclature History

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Previous Names: si:dkeyp-11g8.2, si:dkeyp-11g8.4, wu:fb81g09 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to be involved in transcription, DNA-templated. Predicted to localize to the nucleus. Orthologous to human SWT1 (SWT1 RNA endoribonuclease homolog).
Genome Resources: Alliance (1),  Gene:559432 (1),  Ensembl(GRCz11):ENSDARG00000094010 (2)
GENE EXPRESSION
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH swt1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH swt1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component nucleus (more)
GO Terms (all 1)
PROTEIN FAMILIES, DOMAINS AND SITES
Type InterPro ID Name
Domain IPR002716 PIN domain
Homologous_superfamily IPR029060 PIN-like domain superfamily
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA swt1-201 (1)    Ensembl 3917
swt1-202 (1)    Ensembl 639
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM swt1 No data available
MARKER RELATIONSHIPS
swt1 Contained in: [BAC] DKEYP-11G8 (1)
swt1 Encodes: [EST] fb81g09
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:XM_009294796 (1)
Genomic GenBank:BX957305 (1) 128283 bp
Select Tool
Polypeptide UniProtKB:Q5RG89 (1) 954 aa
Sequence Information (all 20)
ORTHOLOGY for swt1 ( Chr: 20 )
CITATIONS (17)