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ZIRC
ZFIN ID: ZDB-GENE-041010-70
Gene Name: abraxas 1, BRCA1 A complex subunit
Gene Symbol: abraxas1
Sequence Ontology ID : SO:0000704

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Previous Names: abraxas2a, ccdc98 (1), fam175a, zgc:103522

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(Including Attributions)
Location: Chr: 21 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have polyubiquitin modification-dependent protein binding activity; predicted to be involved in several processes, including double-strand break repair, positive regulation of DNA  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7157614]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11677 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH abraxas1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH abraxas1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process double-strand break repair (more)
    Cellular Component BRCA1-A complex (more)
    Molecular Function polyubiquitin modification-dependent protein binding (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR023238 (1)
  • InterPro:IPR023239 (1)
  • InterPro:IPR037518 (1)
  • PROSITE:PS50249 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA abraxas1-201 (1) 1671
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM abraxas1 No data available
    MARKER RELATIONSHIPS
    abraxas1Contained in: [BAC] CH211-85E10 (1) (order this)
    abraxas1Encodes: [EST] IMAGE:7157614 (1) (order this)
    [cDNA] MGC:103522 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001005993 (1) 1439bp
    Genomic GenBank:BX649525 (1) 180584bp
    Select Tool
    Polypeptide UniProtKB:Q1LVP6 (1) 391aa
    Sequence Clusters UniGene:79774 (1)
    Sequence Information (all 17)
    ORTHOLOGY for abraxas1 (Chr: 21)
    CITATIONS (18)