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General Information
ZIRC
ZFIN ID: ZDB-GENE-041010-48
Gene Name: caspase 6b.1, apoptosis-related cysteine peptidase
Gene Symbol: casp6b.1
Sequence Ontology ID : SO:0001217

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Previous Names: casp6b (1), casp6l1, caspase-6b (1), zgc:103604

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cysteine-type endopeptidase activity involved in execution phase of apoptosis. Predicted to be involved in apoptotic process and proteolysis. Human ortholog(s) of this gene  ...
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:103604]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Larval:Day 4 (96.0h-120.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa38400 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH casp6b.1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH casp6b.1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process apoptotic process (more)
    Cellular Component cytoplasm (more)
    Molecular Function cysteine-type endopeptidase activity (more)
    GO Terms (all 7)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA casp6l1-201 (1) 1235
    casp6l1-202 (1) 783
    casp6l1-203 (1) 794
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM casp6b.1 No data available
    MARKER RELATIONSHIPS
    casp6b.1 Contained in: [BAC] DKEY-18H4 (1) (order this)
    casp6b.1 Encodes: [cDNA] MGC:103604 (1) (order this), MGC:193010 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001005973 (1) 1175 bp
    Genomic GenBank:CT583642 (1) 117579 bp
    Select Tool
    Polypeptide UniProtKB:A0A2U9DQN1 (1) 261 aa
    Sequence Clusters UniGene:90030 (1)
    Sequence Information (all 22)
    ORTHOLOGY for casp6b.1 ( Chr: 3 )
    CITATIONS (16)