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ZIRC
ZFIN ID: ZDB-GENE-041010-33
Gene Name: ATP synthase peripheral stalk-membrane subunit b
Gene Symbol: atp5pb
Sequence Ontology ID : SO:0000704

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Previous Names: atp5f1, fb59g11, fj08b08, wu:fb59g11, wu:fj08b08, zgc:101887

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in ATP synthesis coupled proton transport. Predicted to localize to the  ...
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101887]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34405 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • xu0363Gt Transgenic Insertion Unknown Unknown DNA
    PHENOTYPE
    Data: Table 1 from Clark et al., 2011
    Observed in:
    DISEASE ASSOCIATED WITH atp5pb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atp5pb VIA EXPERIMENTAL MODELS No data available
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008688 (1)
  • InterPro:IPR013837 (1)
  • Pfam:PF05405 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA atp5f1-002 (1) 892
    atp5f1-003 (1) 1096
    mRNA atp5pb-202 (1) 2256
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atp5pb No data available
    MARKER RELATIONSHIPS
    atp5pbContained in: [BAC] DKEY-183P4 (1) (order this)
    atp5pbEncodes: [EST] fb59g11, fj08b08
    [cDNA] MGC:101887 (1) (order this), MGC:193026 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001005960 (1) 981bp
    Genomic GenBank:CR847543 (1) 207382bp Blast at MegaBLAST
    Polypeptide UniProtKB:B8JIS1 (1) 252aa
    Sequence Clusters UniGene:76140 (1)
    Sequence Information (all 18)
    ORTHOLOGY for atp5pb (Chr: 8)
    CITATIONS (29)