ZFIN ID: ZDB-GENE-041010-33
Gene Name: ATP synthase peripheral stalk-membrane subunit b
Gene Symbol: atp5pb    Nomenclature History

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Previous Names: atp5f1, fb59g11, fj08b08, wu:fb59g11, wu:fj08b08, zgc:101887

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 8 Mapping Details/Browsers
Description: Predicted to have proton transmembrane transporter activity. Predicted to be involved in ATP synthesis coupled proton transport. Predicted to localize to mitochondrial proton-transporting ATP synthase complex, coupling factor F(o). Is expressed in heart and male organism. Orthologous to human ATP5PB (ATP synthase peripheral stalk-membrane subunit b).
Genome Resources: Alliance (1),  Gene:449787 (1),  Ensembl(GRCz11):ENSDARG00000011553 (2)
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101887]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa34405 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • xu0363Gt Transgenic Insertion Unknown Unknown DNA
    PHENOTYPE
    Data: Table 1 from Clark et al., 2011
    Observed in:
    DISEASE ASSOCIATED WITH atp5pb HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH atp5pb VIA EXPERIMENTAL MODELS No data available
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA atp5pb-202 (1)    Ensembl 2256
    ncRNA atp5f1-002 (1)    Ensembl 892
    atp5f1-003 (1)    Ensembl 1096
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM atp5pb No data available
    MARKER RELATIONSHIPS
    atp5pb Contained in: [BAC] DKEY-183P4 (1) (order this)
    atp5pb Encodes: [EST] fb59g11, fj08b08
    [cDNA] MGC:101887 (1), MGC:193026 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001005960 (1) 981 nt
    Genomic GenBank:CR847543 (1) 207382 nt Blast at MegaBLAST
    Polypeptide UniProtKB:B8JIS1 (1) 252 aa
    Sequence Information (all 17)
    ORTHOLOGY for atp5pb ( Chr: 8 )
    CITATIONS (31)