ZFIN ID: ZDB-GENE-041010-198
Gene Name: THO complex 6
Gene Symbol: thoc6
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:101618

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity; predicted to be involved in several processes, including RNA metabolic process, apoptotic process, and mRNA transport; predicted to localize to the nuclear  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101618]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH thoc6 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
Beaulieu-Boycott-Innes syndrome 613680
DISEASE ASSOCIATED WITH thoc6 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process apoptotic process (more)
Cellular Component nuclear speck (more)
Molecular Function RNA binding (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001680 (1)
  • InterPro:IPR015943 (1)
  • InterPro:IPR017986 (1)
  • InterPro:IPR019775 (1)
  • InterPro:IPR036322 (1)
  • PROSITE:PS00678 (1)
  • PROSITE:PS50082 (1)
  • PROSITE:PS50294 (1)
  • Pfam:PF00400 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA thoc6-001 (1) 1209
    ncRNA thoc6-002 (1) 775
    thoc6-003 (1) 652
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM thoc6 No data available
    MARKER RELATIONSHIPS
    thoc6Contained in: [BAC] DKEY-16L2 (1) (order this)
    thoc6Encodes: [cDNA] MGC:101618 (1) (order this), MGC:174338 (1) (order this), MGC:198300 (1) (order this)
    thoc6Has Artifact: [EST] fb96g10
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001006095 (1) 1198bp
    Genomic GenBank:BX571714 (1) 240105bp Blast at MegaBLAST
    Polypeptide UniProtKB:A0A2R8QU72 (1) 324aa
    Sequence Clusters UniGene:77715 (1)
    Sequence Information (all 21)
    OTHER thoc6 GENE PAGES
  • Alliance (1)
  • Gene:100004014 (1)
  • VEGA:OTTDARG00000021819 (1)
  • ORTHOLOGY for thoc6 (Chr: 3)
    CITATIONS (14)