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ZIRC
ZFIN ID: ZDB-GENE-041010-188
Gene Name: CDKN2A interacting protein
Gene Symbol: cdkn2aip    Nomenclature History

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Attributions

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Previous Names: CARF (1), zgc:101658 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 7 Mapping Details/Browsers
Description: Involved in positive regulation of canonical Wnt signaling pathway. Predicted to localize to the nucleolus and nucleoplasm. Orthologous to human CDKN2AIP (CDKN2A interacting protein).
Genome Resources: Alliance (1),  Gene:450065 (1),  Ensembl(GRCz11):ENSDARG00000035853 (2)
GENE EXPRESSION
All Expression Data: 2 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101658]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 4 (96.0h-120.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
cas009 Indel Unknown Unknown CRISPR
sa21081 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-cdkn2aip 1
    MO1-cdkn2aip N/A 1
    DISEASE ASSOCIATED WITH cdkn2aip HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cdkn2aip VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process positive regulation of canonical Wnt signaling pathway (more)
    Cellular Component nucleolus (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR021859 (1)
  • PROSITE:PS51827 (1)
  • Pfam:PF11952 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cdkn2aip-201 (1)    Ensembl 3180
    cdkn2aip-202 (1)    Ensembl 805
    cdkn2aip-203 (1)    Ensembl 798
    cdkn2aip-204 (1)    Ensembl 916
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cdkn2aip No data available
    MARKER RELATIONSHIPS
    cdkn2aip Encodes: [cDNA] MGC:101658 (1) (order this), MGC:191273 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001006085 (1) 1711 bp
    Polypeptide UniProtKB:F1QZX8 (1) 312 aa
    Sequence Clusters UniGene:105818 (1)
    Sequence Information (all 24)
    ORTHOLOGY for cdkn2aip ( Chr: 7 )
    CITATIONS (16)