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General Information
ZIRC
ZFIN ID: ZDB-GENE-041010-180
Gene Name: exosome component 9
Gene Symbol: exosc9
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: im:6909054, zgc:101680 (1)

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(Including Attributions)
Location: Chr: 1 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have AU-rich element binding activity; predicted to be involved in several processes, including RNA catabolic process, RNA catabolic process, and nucleic acid metabolic process;  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:6909054]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
zko362a Small Deletion Unknown Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH exosc9 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    Pontocerebellar hypoplasia, type 1D 618065
    DISEASE ASSOCIATED WITH exosc9 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process RNA processing (more)
    Cellular Component cytoplasm (more)
    Molecular Function RNA binding (more)
    GO Terms (all 21)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA exosc9-201 (1) 1393
    exosc9-202 (1) 805
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM exosc9 No data available
    MARKER RELATIONSHIPS
    exosc9Contained in: [BAC] CH211-157H5 (1) (order this)
    exosc9Encodes: [EST] IMAGE:6909054 (1) (order this)
    [cDNA] MGC:101680 (1) (order this), MGC:191888 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001006077 (1) 1443bp
    Genomic GenBank:BX323984 (1) 177080bp
    Select Tool
    Polypeptide UniProtKB:Q5XJQ5 (1) 393aa
    Sequence Clusters UniGene:132715 (1)
    Sequence Information (all 15)
    ORTHOLOGY for exosc9 (Chr: 1)
    CITATIONS (20)