ZFIN ID: ZDB-GENE-041010-179
Gene Name: TBC1 domain family, member 16
Gene Symbol: tbc1d16
Sequence Ontology ID : SO:0000704

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Previous Names: fi28h02, wu:fi28h02, zgc:101681

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:101681]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
  whole organism
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023944Tg Transgenic Insertion Unknown Unknown DNA
sa505 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH tbc1d16 HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process activation of GTPase activity (more)
    Cellular Component endomembrane system (more)
    Molecular Function GTPase activator activity (more)
    GO Terms (all 7)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000195
  • PROSITE:PS50086
  • Pfam:PF00566
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA tbc1d16-001 (1) 2660
    ncRNA tbc1d16-002 (1) 594
    mRNA tbc1d16-003 (1) 1265
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tbc1d16 No data available
    MARKER RELATIONSHIPS
    tbc1d16Contained in: [BAC] CH73-46L13 (1) (order this), CH73-54C11 (order this), CH211-139G16 (1) (order this), CH211-246E12 (1) (order this)
    tbc1d16Encodes: [EST] fi28h02
    [cDNA] MGC:101681 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001006076 (1) 2774bp
    Genomic GenBank:CT573440 (1) 159035bp
    Select Tool
    Polypeptide UniProtKB:E7FE32 717aa
    Sequence Clusters UniGene:17359 (1)
    Sequence Information (all 16)
    OTHER tbc1d16 GENE PAGES
  • Gene:450056 (1)
  • VEGA:OTTDARG00000032485 (1)
  • Ensembl(GRCz10):ENSDARG00000036994 (1)
  • ORTHOLOGY for tbc1d16 (Chr: 3)
    CITATIONS (15)