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ZIRC
ZFIN ID: ZDB-GENE-041010-153
Gene Name: leucine rich repeat containing 23
Gene Symbol: lrrc23    Nomenclature History

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Previous Name: zgc:101782 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 23 Mapping Details/Browsers
Description: Involved in cilium movement involved in otolith formation. Predicted to localize to the cytosol. Is expressed in several structures, including Kupffer's vesicle; forerunner cell group; nervous system; pronephric duct; and spinal cord neural keel. Orthologous to human LRRC23 (leucine rich repeat containing 23).
Genome Resources: Alliance (1),  Gene:450033 (1),  Ensembl(GRCz11):ENSDARG00000006174 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ouc2007 Small Deletion Exon 2 Unknown CRISPR
ouc2008 Indel Unknown Unknown CRISPR
sa29907 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-lrrc23 1
    MO1-lrrc23 N/A 1
    DISEASE ASSOCIATED WITH lrrc23 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH lrrc23 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process cilium movement involved in otolith formation (more)
    Cellular Component cytoplasm (more)
    GO Terms (all 3)
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA lrrc23-201 (1)    Ensembl 1540
    ncRNA lrrc23-002 (1)    Ensembl 597
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM lrrc23 No data available
    MARKER RELATIONSHIPS
    lrrc23 Contained in: [BAC] DKEY-32E6 (1) (order this)
    lrrc23 Encodes: [cDNA] MGC:101782 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001006054 (1) 1548 bp
    Genomic GenBank:AL953864 (1) 249608 bp Blast at MegaBLAST
    Polypeptide UniProtKB:B7ZDB1 (1) 326 aa
    Sequence Clusters UniGene:26041 (1)
    Sequence Information (all 10)
    ORTHOLOGY for lrrc23 ( Chr: 23 )
    CITATIONS (19)