ZFIN is now using GRCz12tu for Genomic Data
Gene
cited2
- ID
- ZDB-GENE-041010-141
- Name
- Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
- Symbol
- cited2 Nomenclature History
- Previous Names
-
- zgc:103418
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable transcription coactivator activity. Predicted to act upstream of or within regulation of DNA-templated transcription. Predicted to be active in nucleus. Is expressed in several structures, including brain; immature eye; lens; optic primordium; and pharyngeal arch. Used to study congenital heart disease. Human ortholog(s) of this gene implicated in atrial heart septal defect 8 and ventricular septal defect. Orthologous to human CITED2 (Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 12 figures from 5 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:103418 (19 images)
Wild Type Expression Summary
- All Phenotype Data
- 3 figures from Santos et al., 2019
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| atrial heart septal defect 8 | Alliance | Atrial septal defect 8 | 614433 |
| ventricular septal defect | Alliance | Ventricular septal defect 2 | 614431 |
| Human Disease | Fish | Conditions | Citations |
|---|---|---|---|
| congenital heart disease | AB + MO1-cited2 + MO2-cited2 | standard conditions | Santos et al., 2019 |
| congenital heart disease | AB + MO2-cited2 | standard conditions | Santos et al., 2019 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR007576 | CITED |
Domain Details Per Protein
| Protein | Additional Resources | Length | CITED |
|---|---|---|---|
| UniProtKB:Q5XJD6 | InterPro | 222 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cited2-201
(1)
|
Ensembl | 2,345 nt |
Interactions and Pathways
No data available
Plasmids
- Genome Browsers