ZFIN ID: ZDB-GENE-041010-13
Gene Name: zgc:103700
Gene Symbol: zgc:103700    Nomenclature History

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Previous Name: MHCII (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Unmapped
Description: Predicted to be involved in antigen processing and presentation and immune response. Predicted to localize to MHC class II protein complex and integral component of membrane. Is expressed in yolk syncytial layer.
Genome Resources: Alliance (1),  Gene:103911540 (1),  Ensembl(GRCz11):ENSDARG00000116524 (1)

Nomenclature Note: This gene is characterized by full length cDNAs isolated as part of the Zebrafish Gene Collection (ZGC). When more is known about the gene, the current nomenclature will be replaced with more traditional zebrafish gene nomenclature. The prefix `zgc:' indicates that this gene is represented by cDNAs generated by the ZGC project.

GENE EXPRESSION
All Expression Data: 7 figures from 2 publications
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [MGC:103700]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Pharyngula:Prim-5 (24.0h-30.0h)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH zgc:103700 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH zgc:103700 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process antigen processing and presentation (more)
Cellular Component integral component of membrane (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS No data available
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM zgc:103700 No data available
MARKER RELATIONSHIPS
zgc:103700 Encodes: [cDNA] MGC:103700 (1), MGC:191164 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001005943 (1) 1434 nt
Genomic GenBank:CABZ01014762 (1)
Polypeptide UniProtKB:A0A0R4IR31 (1) 250 aa
Sequence Information (all 18)
ORTHOLOGY for zgc:103700 ( Unmapped )
CITATIONS (23)