ZFIN ID: ZDB-GENE-041010-127
Gene Name: RALY heterogeneous nuclear ribonucleoprotein
Gene Symbol: raly
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:103445

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity; predicted to localize to the nucleus; orthologous to human RALY (RALY heterogeneous nuclear ribonucleoprotein).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (8 images) from Thisse et al., 2004 [MGC:103445]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH raly HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH raly VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Cellular Component nucleus (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000504 (1)
  • InterPro:IPR012677 (1)
  • InterPro:IPR017347 (1)
  • InterPro:IPR034502 (1)
  • InterPro:IPR035979 (1)
  • PROSITE:PS50102 (1)
  • Pfam:PF00076 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA raly-201 (1) 1531
    raly-202 (1) 1005
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM raly No data available
    MARKER RELATIONSHIPS
    ralyContained in: [BAC] CH73-100J6 (1) (order this), CH73-305D13 (1) (order this), DKEY-16N21 (1) (order this)
    [Fosmid] CH1073-51A17 (1) (order this)
    ralyEncodes: [cDNA] MGC:103445 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_205610 (1) 1542bp
    Genomic GenBank:BX276106 (1) 220671bp Blast at MegaBLAST
    Polypeptide UniProtKB:F1QAY0 (1) 273aa
    Sequence Clusters UniGene:133570 (1)
    Sequence Information (all 26)
    OTHER raly GENE PAGES
  • Alliance (1)
  • Gene:402903 (1)
  • VEGA:OTTDARG00000019931 (1)
  • Ensembl(GRCz11):ENSDARG00000059972 (2)
  • ORTHOLOGY for raly (Chr: 6)
    CITATIONS (19)