ZFIN ID: ZDB-GENE-041010-123
Gene Name: mitochondrial ribosomal protein S16
Gene Symbol: mrps16    Nomenclature History

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Previous Names: fi21d03, wu:fi21d03, zgc:103459 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 11 Mapping Details/Browsers
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to localize to mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 2. Is expressed in alar plate midbrain region; eye; immature eye; midbrain; and optic tectum. Orthologous to human MRPS16 (mitochondrial ribosomal protein S16).
Genome Resources: Alliance (1),  Gene:450009 (1),  Ensembl(GRCz11):ENSDARG00000098972 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:103459]
  6 figures (11 images) from Thisse et al., 2004 [IMAGE:7156446]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH mrps16 HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
combined oxidative phosphorylation deficiency 2 Alliance Combined oxidative phosphorylation deficiency 2 610498
DISEASE ASSOCIATED WITH mrps16 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process translation (more)
Cellular Component ribosome (more)
Molecular Function structural constituent of ribosome (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA mrps16-201 (1)    Ensembl 1086
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM mrps16 No data available
MARKER RELATIONSHIPS
mrps16 Encodes: [EST] fi21d03, IMAGE:7156446 (1)
[cDNA] MGC:103459 (1), MGC:192111 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001006030 (1) 1098 nt
Genomic RefSeq:NW_018394827 (1) Blast at MegaBLAST
Polypeptide UniProtKB:A0A0R4IRT6 (1) 129 aa
Sequence Information (all 17)
ORTHOLOGY for mrps16 ( Chr: 11 )
CITATIONS (20)