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General Information
ZIRC
ZFIN ID: ZDB-GENE-041010-119
Gene Name: cysteine and glycine-rich protein 3 (cardiac LIM protein)
Gene Symbol: csrp3
Sequence Ontology ID : SO:0000704

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Previous Names: csrp3b (1), Muscle LIM protein (1), zgc:103468

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(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have metal ion binding activity; involved in heart contraction and sarcomere organization; orthologous to human CSRP3 (cysteine and glycine rich protein 3).
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb244 Insertion Exon 3 Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • ihb245 Small Deletion Exon 3 Unknown CRISPR
  • China Zebrafish Resource Center (CZRC, ZKO consortium) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH csrp3 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    dilated cardiomyopathy 1M ?Cardiomyopathy, dilated, 1M 607482
    hypertrophic cardiomyopathy 12 Cardiomyopathy, hypertrophic, 12 612124
    DISEASE ASSOCIATED WITH csrp3 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process heart contraction (more)
    Cellular Component cytoplasm (more)
    Molecular Function metal ion binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001781 (1)
  • PROSITE:PS00478 (1)
  • PROSITE:PS50023 (1)
  • Pfam:PF00412 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA csrp3-201 (1) 1431
    csrp3-203 (1) 785
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM csrp3 No data available
    MARKER RELATIONSHIPS
    csrp3Contained in: [BAC] CH211-215H6 (1) (order this)
    csrp3Encodes: [cDNA] MGC:103468 (1) (order this), MGC:192167 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001006026 (1) 1063bp
    Genomic GenBank:CU041375 (1) 99890bp
    Select Tool
    Polypeptide UniProtKB:F1QJC0 (1) 193aa
    Sequence Clusters UniGene:85255 (1)
    Sequence Information (all 17)
    ORTHOLOGY for csrp3 (Chr: 7)
    CITATIONS (20)