ZFIN ID: ZDB-GENE-041010-104
Gene Name: ATPase, H+ transporting, lysosomal, V1 subunit C1b
Gene Symbol: atp6v1c1b
Sequence Ontology ID : SO:0000704

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Previous Names: atp6v1c1l, si:zc215i13.2 (1), zgc:92684 (1)

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (7 images) from Thisse et al., 2004 [MGC:92684]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Hatching:Long-pec (48.0h-60.0h)
  central nervous system, head mesenchyme, mucus secreting cell, neuron (all 9) expand
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa6563 Point Mutation Unknown Premature Stop ENU
sa23559 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH atp6v1c1b HUMAN ORTHOLOGNo data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ATP hydrolysis coupled proton transport (more)
    Cellular Component proton-transporting V-type ATPase, V1 domain (more)
    Molecular Function hydrogen ion transmembrane transporter activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004907 (1)
  • Pfam:PF03223 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA atp6v1c1b-001 (1) 1928
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM atp6v1c1b No data available
    MARKER RELATIONSHIPS
    atp6v1c1bContained in: [BAC] CH211-215I13 (1) (order this)
    atp6v1c1bEncodes: [cDNA] MGC:92684 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001005772 (1) 1928bp
    Genomic GenBank:AL807244 (1) 201745bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q5XIY6 (1) 381aa
    Sequence Clusters UniGene:14847 (1)
    Sequence Information (all 11)
    OTHER atp6v1c1b GENE PAGES
  • Alliance (1)
  • Gene:449655 (1)
  • VEGA:OTTDARG00000001970 (1)
  • Ensembl(GRCz10):ENSDARG00000035880 (1)
  • ORTHOLOGY for atp6v1c1b (Chr: 19)
    CITATIONS (19)