ZFIN ID: ZDB-GENE-041008-237
Gene Name: supervillin c
Gene Symbol: svilc    Nomenclature History

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Previous Names: im:7142403 (1), si:dkeyp-57f11.2 (1)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 3 Mapping Details/Browsers
Description: Predicted to have actin filament binding activity. Predicted to be involved in actin polymerization or depolymerization. Predicted to localize to actin cytoskeleton and cytoplasm. Is expressed in anterior macula; hair cell; inner ear; posterior crista; and posterior macula. Orthologous to human SVIL (supervillin).
Genome Resources: Alliance (1),  Gene:100006087 (1),  Ensembl(GRCz11):ENSDARG00000017036 (2)
GENE EXPRESSION
All Expression Data: Fig. 2 from Pollock et al., 2016
Wild-type Stages, Structures: Larval:Day 4 (96.0h-120.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: Expression Atlas (1)
PHENOTYPE No data available
DISEASE ASSOCIATED WITH svilc HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH svilc VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cytoskeleton organization (more)
Cellular Component actin cytoskeleton (more)
Molecular Function actin binding (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA si:dkeyp-57f11.2-201 (1)    Ensembl 832
si:dkeyp-57f11.2-202 (1)    Ensembl 4901
Browsers: NCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM svilc No data available
MARKER RELATIONSHIPS
svilc Contained in: [BAC] DKEYP-57F11 (1)
svilc Encodes: [EST] IMAGE:7142403 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:XM_005164166 (1) 5214 nt
Genomic GenBank:CR392006 (1) 99278 nt
Select Tool
Polypeptide UniProtKB:X1WDI1 (1) 1531 aa
Sequence Information (all 25)
ORTHOLOGY for svilc ( Chr: 3 )
CITATIONS (17)