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ZIRC
ZFIN ID: ZDB-GENE-041008-187
Gene Name: ubiquitin specific peptidase 4 (proto-oncogene)
Gene Symbol: usp4
Sequence Ontology ID : SO:0001217

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Attributions

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Previous Names: im:7139722, unpEL (1), wu:fa11d11

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(Including Attributions)
Location: Chr: 6 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have thiol-dependent ubiquitin-specific protease activity. Involved in convergent extension; negative regulation of toll-like receptor signaling pathway; and protein deubiquitination.  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7139722]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa12557 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33937 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    DISEASE ASSOCIATED WITH usp4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH usp4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process convergent extension (more)
    Cellular Component nucleus (more)
    Molecular Function thiol-dependent ubiquitin-specific protease activity (more)
    GO Terms (all 7)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA usp4-201 (1) 4871
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM usp4 No data available
    MARKER RELATIONSHIPS
    usp4 Contained in: [BAC] DKEY-178O3 (1) (order this)
    usp4 Encodes: [EST] fa11d11, IMAGE:7139722 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_002662510 (1) 4684 bp
    Genomic GenBank:BX957236 (1) 211391 bp Blast at MegaBLAST
    Polypeptide UniProtKB:E7EZD6 (1) 1009 aa
    Sequence Clusters UniGene:125623 (1)
    Sequence Information (all 15)
    ORTHOLOGY for usp4 ( Chr: 6 )
    CITATIONS (19)