ZFIN ID: ZDB-GENE-041008-147
Gene Name: general transcription factor IIIC, polypeptide 4
Gene Symbol: gtf3c4    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: im:7138272, si:dkeyp-10e10.3 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 21 Mapping Details/Browsers
Description: Predicted to localize to the transcription factor TFIIIC complex. Orthologous to human GTF3C4 (general transcription factor IIIC subunit 4).
Genome Resources: Alliance (1),  Gene:568510 (1),  Ensembl(GRCz11):ENSDARG00000069538 (2)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7138272]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa43614 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH gtf3c4 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH gtf3c4 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process biological_process (more)
    Cellular Component transcription factor TFIIIC complex (more)
    Molecular Function molecular_function (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
    Type InterPro ID Name
    Homologous_superfamily IPR015943 WD40/YVTN repeat-like-containing domain superfamily
    Domain IPR024761 Transcription factor IIIC, 90kDa subunit, N-terminal
    Domain IPR024764 Transcription factor IIIC, putative zinc-finger
    Homologous_superfamily IPR036322 WD40-repeat-containing domain superfamily
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA gtf3c4-201 (1)    Ensembl 2545
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM gtf3c4 No data available
    MARKER RELATIONSHIPS
    gtf3c4 Contained in: [BAC] CH211-196O18 (1)
    gtf3c4 Encodes: [EST] IMAGE:7138272 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_021473407 (1)
    Genomic GenBank:BX088716 (1) 156079 bp
    Select Tool
    Polypeptide UniProtKB:F1Q9E5 (1) 699 aa
    Sequence Information (all 21)
    ORTHOLOGY for gtf3c4 ( Chr: 21 )
    CITATIONS (18)