ZFIN ID: ZDB-GENE-041007-5
Gene Name: ephrin-A1b
Gene Symbol: efna1b
Sequence Ontology ID : SO:0000704

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Previous Name: efna1 (1)

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have ephrin receptor binding activity; predicted to be involved in axon guidance and ephrin receptor signaling pathway; predicted to localize to the plasma membrane; orthologous to human  ...
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 7 figures (22 images) from Thisse et al., 2004 [MGC:73307]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la010493Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42713 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH efna1b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH efna1b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process ephrin receptor signaling pathway (more)
    Cellular Component membrane (more)
    Molecular Function ephrin receptor binding (more)
    GO Terms (all 6)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001799 (1)
  • InterPro:IPR008972 (1)
  • InterPro:IPR019765 (1)
  • InterPro:IPR031328 (1)
  • InterPro:IPR034252 (1)
  • PROSITE:PS01299 (1)
  • PROSITE:PS51551 (1)
  • Pfam:PF00812 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA efna1b-001 (1) 1809
    ncRNA efna1b-002 (1) 687
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM efna1b No data available
    MARKER RELATIONSHIPS
    efna1bContained in: [BAC] CH211-186G6 (1) (order this)
    efna1bEncodes: [cDNA] MGC:73307 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200783 (1) 1903bp
    Genomic GenBank:AL935167 (1) 137333bp
    Select Tool
    Polypeptide UniProtKB:O93431 (1) 229aa
    Sequence Clusters UniGene:104284 (1)
    Sequence Information (all 14)
    OTHER efna1b GENE PAGES
  • Alliance (1)
  • Gene:494151 (1)
  • VEGA:OTTDARG00000020923 (1)
  • Ensembl(GRCz11):ENSDARG00000018787 (2)
  • ORTHOLOGY for efna1b (Chr: 16)
    CITATIONS (33)