ZFIN is now using GRCz12tu for Genomic Data
Gene
polr1f
- ID
- ZDB-GENE-041007-3
- Name
- RNA polymerase I subunit F
- Symbol
- polr1f Nomenclature History
- Previous Names
-
- twistnb
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in transcription elongation by RNA polymerase I. Predicted to act upstream of or within DNA-templated transcription. Predicted to be located in nucleolus. Predicted to be part of RNA polymerase I complex. Orthologous to human POLR1F (RNA polymerase I subunit F).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7147652 (1 image)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR005576 | RNA polymerase Rpb7-like , N-terminal |
| Domain | IPR041178 | RPA43, OB domain |
| Domain | IPR041901 | Rpa43, N-terminal ribonucleoprotein (RNP) domain |
| Family | IPR045113 | RNA polymerase subunit Rpb7-like |
| Homologous_superfamily | IPR036898 | RNA polymerase Rpb7-like, N-terminal domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | RNA polymerase Rpb7-like , N-terminal | RNA polymerase Rpb7-like, N-terminal domain superfamily | RNA polymerase subunit Rpb7-like | Rpa43, N-terminal ribonucleoprotein (RNP) domain | RPA43, OB domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M6Z2B1 | InterPro | 347 | |||||
| UniProtKB:Q6PHG8 | InterPro | 391 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
polr1f-201
(1)
|
Ensembl | 3,924 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers