header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-041001-202
Gene Name: dermatan sulfate epimerase
Gene Symbol: dse    Nomenclature History

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: si:dkey-121j17.2

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to localize to the integral component of membrane. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome. Is expressed in head; immature eye; pectoral fin; and somite. Orthologous to human DSE (dermatan sulfate epimerase).
Genome Resources: Alliance (1),  Gene:568713 (1),  Ensembl(GRCz11):ENSDARG00000017988 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa32267 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36930 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • sa45685 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH dse HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    Ehlers-Danlos syndrome, musculocontractural type 2 615539
    DISEASE ASSOCIATED WITH dse VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process chondroitin sulfate metabolic process (more)
    Cellular Component integral component of membrane (more)
    Molecular Function chondroitin-glucuronate 5-epimerase activity (more)
    GO Terms (all 5)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008929 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA dse-201 (1)    Ensembl 4405
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM dse No data available
    MARKER RELATIONSHIPS
    dse Contained in: [BAC] DKEY-121J17 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001030225 (1) 3047 bp
    Genomic GenBank:BX855610 (1) 139210 bp
    Select Tool
    Polypeptide UniProtKB:Q5RGL8 (1) 949 aa
    Sequence Clusters UniGene:48488 (1)
    Sequence Information (all 9)
    ORTHOLOGY for dse ( Chr: 20 )
    CITATIONS (17)