ZFIN ID: ZDB-GENE-041001-130
Gene Name: forkhead box F2b
Gene Symbol: foxf2b    Nomenclature History

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Previous Names: foxf2, si:dkey-100f21.4

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 20 Mapping Details/Browsers
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in pericyte cell differentiation and vascular smooth muscle cell development. Predicted to localize to nucleus. Is expressed in head mesenchyme; pharyngeal arch 1; and pharyngeal arch 2. Orthologous to human FOXF2 (forkhead box F2).
Genome Resources: Alliance (1),  Gene:100002904 (1),  Ensembl(GRCz11):ENSDARG00000070389 (2)
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Wild-type Stages, Structures: Pharyngula:Prim-15 (30.0h-36.0h) to Pharyngula:Prim-25 (36.0h-42.0h)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ca22 Point Mutation Exon 1 Frameshift, Premature Stop TALEN
ca23 Indel Exon 1 Frameshift, Premature Stop TALEN
el621 Indel Unknown Unknown CRISPR
sa37042 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-foxf2b 1
    TALEN1-foxf2b 1
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH foxf2b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH foxf2b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process pericyte cell differentiation (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 8)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA foxf2b-201 (1)    Ensembl 2027
    Browsers: NCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM foxf2b No data available
    MARKER RELATIONSHIPS
    foxf2b Contained in: [BAC] DKEY-100F21 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:XM_003200706 (1) 2016 nt
    Genomic GenBank:BX510653 (1) 90530 nt
    Select Tool
    Polypeptide UniProtKB:E7FER3 (1) 429 aa
    Sequence Information (all 6)
    ORTHOLOGY for foxf2b ( Chr: 20 )
    CITATIONS (19)