Gene

nitr3c

ID

ZDB-GENE-041001-13

Name

novel immune-type receptor 3c

Symbol

nitr3c Nomenclature History

Previous Names

nitr3.5 (1)
nitr3.8 (1)
si:busm1-221h6.2 (1)
si:dz221h6.2
zgc:109830

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:109830 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With nitr3c Human Ortholog

No data available

Associated With nitr3c Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003599	Immunoglobulin subtype
Domain	IPR007110	Immunoglobulin-like domain
Domain	IPR013106	Immunoglobulin V-set domain
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	Immunoglobulin subtype	Immunoglobulin V-set domain
UniProtKB:A0A0N4SU52 InterPro	365
UniProtKB:A0A0N4SU51 InterPro	231
UniProtKB:A0A0N4SU19 InterPro	305
UniProtKB:A0A0N4SU08 InterPro	230
UniProtKB:Q8UV75 InterPro	333
UniProtKB:Q504I4 InterPro	301
UniProtKB:Q5SNP5 InterPro	333

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	nitr3c-207 (1) Ensembl	1014 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	nitr3c-210 (1) Ensembl	1282 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ottdart00000001481 (1)	1240 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	nitr3c-003 (1) Ensembl	378 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations