ZFIN ID: ZDB-GENE-041001-122
Gene Name: SEL1L adaptor subunit of ERAD E3 ubiquitin ligase
Gene Symbol: sel1l
Sequence Ontology ID : SO:0000704

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Previous Names: fj60e07, si:dkey-177p2.3 (1), wu:fj60e07

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Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Orthologous to human SEL1L (SEL1L, ERAD E3 ligase adaptor subunit).
GENE EXPRESSION
All Expression Data: 8 figures from 2 publications
Directly Submitted Expression Data: 6 figures (6 images) from Thisse et al., 2005 [eu1578]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE
Data: 3 figures from Barbieri et al., 2017
Observed in:
DISEASE ASSOCIATED WITH sel1l HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH sel1l VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY No data available
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000562 (1)
  • InterPro:IPR006597 (1)
  • InterPro:IPR011990 (1)
  • InterPro:IPR013806 (1)
  • InterPro:IPR036943 (1)
  • PROSITE:PS00023 (1)
  • PROSITE:PS51092 (1)
  • Pfam:PF00040 (1)
  • Pfam:PF08238 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sel1l-001 (1) 4360
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sel1l No data available
    MARKER RELATIONSHIPS
    sel1lContained in: [BAC] DKEY-177P2 (1) (order this)
    sel1lEncodes: [EST] eu1578 (1), fj60e07
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001045164 (1) 3560bp
    Genomic GenBank:BX248515 (1) 212105bp Blast at MegaBLAST
    Polypeptide UniProtKB:K9L5F8 (1) 776aa
    Sequence Clusters UniGene:15492 (1)
    Sequence Information (all 16)
    OTHER sel1l GENE PAGES
  • Alliance (1)
  • Gene:568615 (1)
  • VEGA:OTTDARG00000005248 (1)
  • Ensembl(GRCz11):ENSDARG00000004581 (2)
  • ORTHOLOGY for sel1l (Chr: 20)
    CITATIONS (19)