ZFIN ID: ZDB-GENE-040927-17
Gene Name: carnitine O-acetyltransferase a
Gene Symbol: crata    Nomenclature History

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Previous Names: hm:zeh0248, zeh0248, zgc:92317

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to have carnitine O-acetyltransferase activity. Predicted to be involved in carnitine metabolic process, CoA-linked. Predicted to localize to peroxisome. Human ortholog(s) of this gene implicated in neurodegeneration with brain iron accumulation. Orthologous to human CRAT (carnitine O-acetyltransferase).
Genome Resources: Alliance (1),  Gene:449545 (1),  Ensembl(GRCz11):ENSDARG00000040248 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu2430]
High Throughput Expression: GEO (1) , Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH crata HUMAN ORTHOLOG
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
?Neurodegeneration with brain iron accumulation 8 617917
DISEASE ASSOCIATED WITH crata VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process carnitine metabolic process, CoA-linked (more)
Cellular Component peroxisome (more)
Molecular Function transferase activity (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA crata-201 (1)    Ensembl 2528
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM crata No data available
MARKER RELATIONSHIPS
crata Contained in: [BAC] CH211-208H16 (1)
crata Encodes: [EST] eu2430 (1), zeh0248
[cDNA] MGC:92317 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001005587 (1) 2370 nt
Genomic GenBank:CR925757 (1) 154617 nt
Select Tool
Polypeptide UniProtKB:Q642H6 (1) 631 aa
Sequence Information (all 12)
ORTHOLOGY for crata ( Chr: 5 )
CITATIONS (21)