ZFIN ID: ZDB-GENE-040924-2
Gene Name: charged multivesicular body protein 6b
Gene Symbol: chmp6b    Nomenclature History

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Previous Names: chmp6l, flj11749l, wu:fb79d02, zgc:110067

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 12 Mapping Details/Browsers
Description: Predicted to be involved in late endosome to vacuole transport via multivesicular body sorting pathway and vesicle budding from membrane. Predicted to localize to ESCRT III complex and multivesicular body. Orthologous to human CHMP6 (charged multivesicular body protein 6).
Genome Resources: Alliance (1),  Gene:445397 (1),  Ensembl(GRCz11):ENSDARG00000102024 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:110067]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
PHENOTYPE
Data: 2 figures from 2 publications
Observed in:
DISEASE ASSOCIATED WITH chmp6b HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH chmp6b VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process protein transport (more)
Cellular Component endosome (more)
GO Terms (all 9)
PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
TRANSCRIPTS
Type Name Length (nt) Analysis
mRNA chmp6b-202 (1)    Ensembl 686
Browsers: UCSCNCBIEnsemblZFIN
INTERACTIONS AND PATHWAYS
ANTIBODIES No data available
PLASMIDS No data available
CONSTRUCTS WITH SEQUENCES FROM chmp6b No data available
MARKER RELATIONSHIPS
chmp6b Contained in: [Fosmid] CH1073-108L19 (1)
chmp6b Encodes: [EST] fb79d02 (1)
[cDNA] MGC:110067 (1), MGC:191472 (1)
SEQUENCE INFORMATION
Type Accession # Length (nt/aa) Analysis
RNA RefSeq:NM_001003874 (1) 2442 nt
Genomic GenBank:FO704669 (1) 43041 nt
Select Tool
Polypeptide UniProtKB:B2GPC9 (1) 206 aa
Sequence Information (all 22)
ORTHOLOGY for chmp6b ( Chr: 12 )
CITATIONS (31)