ZFIN ID: ZDB-GENE-040916-1
Gene Name: S100 calcium binding protein A1
Gene Symbol: s100a1
Sequence Ontology ID : SO:0000704

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(Including Attributions)
Location: Chr: 16 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity; predicted to be involved in regulation of heart contraction; orthologous to human S100A1 (S100 calcium binding protein A1).
GENE EXPRESSION
All Expression Data: 4 figures from 3 publications
Wild-type Stages, Structures: Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH s100a1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH s100a1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process regulation of heart contraction (more)
Molecular Function calcium ion binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001751 (1)
  • InterPro:IPR002048 (1)
  • InterPro:IPR011992 (1)
  • InterPro:IPR013787 (1)
  • InterPro:IPR018247 (1)
  • InterPro:IPR028486 (1)
  • PROSITE:PS00018 (1)
  • PROSITE:PS00303 (1)
  • PROSITE:PS50222 (1)
  • Pfam:PF00036 (1)
  • Pfam:PF01023 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA s100a1-201 (1) 628
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM s100a1 No data available
    MARKER RELATIONSHIPS
    s100a1Contained in: [BAC] CH211-113G11 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001089351 (1) 658bp
    Genomic GenBank:AL954306 (1) 169830bp
    Select Tool
    Polypeptide UniProtKB:A3KH13 (1) 96aa
    Sequence Clusters UniGene:13960 (1)
    Sequence Information (all 16)
    OTHER s100a1 GENE PAGES
  • Alliance (1)
  • Gene:448856 (1)
  • VEGA:OTTDARG00000009597 (1)
  • Ensembl(GRCz11):ENSDARG00000015543 (2)
  • ORTHOLOGY for s100a1 (Chr: 16)
    CITATIONS (20)