ZFIN ID: ZDB-GENE-040912-78
Gene Name: transglutaminase 2, C polypeptide A
Gene Symbol: tgm2a
Previous Names: TG2c (1), tgm2, zgc:101081
Location: Chr: 23 Details
Nomenclature History
GENE EXPRESSION
All Expression Data: 10 figures from 3 publications
Directly Submitted Expression Data: 3 figures (2 images) from Thisse et al., 2004 [IMAGE:7137767]
  4 figures (3 images) from Thisse et al., 2004 [IMAGE:7146244]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Adult (90d-730d, breeding adult)
  muscle, myotome, skeletal muscle, somite (all 6) expand
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH tgm2a HUMAN ORTHOLOGNo data available
GENE ONTOLOGY
Ontology GO Term
Biological Process peptide cross-linking (more)
Cellular Component cellular_component (more)
Molecular Function metal ion binding (more)
GO Terms (all 4)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001102 (1)
  • InterPro:IPR002931 (1)
  • InterPro:IPR008958 (1)
  • InterPro:IPR013783 (1)
  • InterPro:IPR013808 (1)
  • InterPro:IPR014756 (1)
  • InterPro:IPR023608 (1)
  • PROSITE:PS00547 (1)
  • Pfam:PF00868 (1)
  • Pfam:PF00927 (1)
  • Pfam:PF01841 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ottdart00000062054 (1) 2120
    ncRNA ottdart00000062056 (1) 976
    ottdart00000062057 (1) 788
     Withdrawn Transcriptsextinct
    GENE PRODUCT DESCRIPTION
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM tgm2a No data available
    SEGMENT (CLONE AND PROBE) RELATIONSHIPS
    tgm2aContained in: [BAC] DKEY-65J6 (1) (order this), DKEY-151K14 (1) (order this)
    tgm2aEncodes: [EST] IMAGE:7137767 (1) (order this), IMAGE:7146244 (1) (order this)
    [cDNA] MGC:101081 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001004647 (1) 2101bp
    Genomic GenBank:CR545469 (1) 145419bp
    Select Tool
    Polypeptide UniProtKB:F1R1A8 (1) 679aa
    Sequence Clusters UniGene:88666 (1)
    Sequence Information (all 12)
    OTHER tgm2a GENE PAGES
  • Gene:447909 (1)
  • VEGA:OTTDARG00000042927 (1)
  • Ensembl(GRCz10):ENSDARG00000070157 (1)
  • ORTHOLOGY for tgm2a (Chr: 23)
    Species Symbol Chromosome Accession # Evidence
    Human TGM2 20
  • Gene:7052
  • OMIM:190196
  • HGNC:11778
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Mouse Tgm2 2
  • MGI:98731
  • Gene:21817
  • Amino acid sequence comparison (1)
    Conserved genome location (synteny) (1)
    Download Curated Orthology
    CITATIONS (15)