ZFIN ID: ZDB-GENE-040912-20
Gene Name: ribosomal modification protein rimK-like family member A
Gene Symbol: rimkla
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: NAAGS (1), wu:fc60e09, zgc:92164

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(Including Attributions)
Location: Chr: 8 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have N-acetyl-L-aspartate-L-glutamate ligase activity and citrate-L-glutamate ligase activity; predicted to be involved in cellular protein modification process; predicted to localize to  ...
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH rimkla HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH rimkla VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cellular protein modification process (more)
Cellular Component cytoplasm (more)
Molecular Function citrate-L-glutamate ligase activity (more)
GO Terms (all 8)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR004666 (1)
  • InterPro:IPR011761 (1)
  • InterPro:IPR013651 (1)
  • InterPro:IPR013815 (1)
  • PROSITE:PS50975 (1)
  • Pfam:PF08443 (1)
  • EC:6.3.2.41 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA rimkla-201 (1) 4229
    rimkla-202 (1) 559
    rimkla-203 (1) 798
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM rimkla No data available
    MARKER RELATIONSHIPS
    rimklaContained in: [BAC] CH211-156J16 (1) (order this)
    rimklaEncodes: [EST] fc60e09
    [cDNA] MGC:92164 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001004554 (1) 2105bp
    Genomic GenBank:CT573404 (1) 126288bp
    Select Tool
    Polypeptide UniProtKB:Q66HZ2 (1) 405aa
    Sequence Clusters UniGene:77190 (1)
    Sequence Information (all 16)
    OTHER rimkla GENE PAGES
  • Alliance (1)
  • Gene:447815 (1)
  • VEGA:OTTDARG00000026794 (1)
  • ORTHOLOGY for rimkla (Chr: 8)
    CITATIONS (19)