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ZIRC
ZFIN ID: ZDB-GENE-040912-162
Gene Name: carnitine O-acetyltransferase b
Gene Symbol: cratb
Sequence Ontology ID : SO:0000704

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Previous Names: crat, wu:fc39c02, zgc:92131

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have carnitine O-acetyltransferase activity. Predicted to be involved in carnitine metabolic process, CoA-linked. Predicted to localize to the peroxisome. Human ortholog(s) of this gene  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7141185]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa23495 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cratb HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    ?Neurodegeneration with brain iron accumulation 8 617917
    ?Neurodegeneration with brain iron accumulation 8 617917
    DISEASE ASSOCIATED WITH cratb VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process carnitine metabolic process, CoA-linked (more)
    Cellular Component peroxisome (more)
    Molecular Function transferase activity (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA cratb-002 (1) 756
    mRNA cratb-201 (1) 2523
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cratb No data available
    MARKER RELATIONSHIPS
    cratbContained in: [BAC] DKEY-63J1 (1) (order this)
    [Fosmid] CH1073-260N23 (1) (order this)
    cratbEncodes: [EST] fc39c02, IMAGE:7141185 (1) (order this)
    [cDNA] MGC:92131 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001004594 (1) 2459bp
    Genomic GenBank:BX511164 214001bp Blast at MegaBLAST
    Polypeptide UniProtKB:A3KPZ2 (1) 614aa
    Sequence Clusters UniGene:103692 (1)
    Sequence Information (all 17)
    ORTHOLOGY for cratb (Chr: 19)
    CITATIONS (19)