ZFIN ID: ZDB-GENE-040908-1
Gene Name: splicing factor 3a, subunit 3
Gene Symbol: sf3a3
Sequence Ontology ID : SO:0000704

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Previous Names: wu:fi15a06, wu:fj94f01, zgc:110227

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(Including Attributions)
Location: Chr: 19 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have RNA binding activity; involved in hematopoietic stem cell differentiation; predicted to localize to the spliceosomal complex; orthologous to human SF3A3 (splicing factor 3a subunit  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7139354]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
PHENOTYPE
Data: 3 figures from 3 publications
Observed in:
DISEASE ASSOCIATED WITH sf3a3 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH sf3a3 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process hematopoietic stem cell differentiation (more)
Cellular Component nucleus (more)
Molecular Function nucleic acid binding (more)
GO Terms (all 7)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000690 (1)
  • InterPro:IPR021966 (1)
  • InterPro:IPR024598 (1)
  • InterPro:IPR031774 (1)
  • InterPro:IPR031776 (1)
  • PROSITE:PS50171 (1)
  • Pfam:PF11931 (1)
  • Pfam:PF12108 (1)
  • Pfam:PF16837 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA sf3a3-001 (1) 2016
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    SignaFish
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM sf3a3 No data available
    MARKER RELATIONSHIPS
    sf3a3Contained in: [BAC] CH211-30B16 (1) (order this)
    sf3a3Encodes: [EST] fi15a06 (1), fj94f01 (1), IMAGE:7139354 (1) (order this)
    [cDNA] MGC:109878 (1), MGC:110227 (1) (order this), MGC:192710 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001004289 (1) 2216bp
    Genomic GenBank:CR925717 (1) 103832bp
    Select Tool
    Polypeptide UniProtKB:A0A0R4ILH7 (1) 501aa
    Sequence Clusters UniGene:79368 (1)
    Sequence Information (all 29)
    OTHER sf3a3 GENE PAGES
  • Alliance (1)
  • Gene:446168 (1)
  • VEGA:OTTDARG00000015078 (1)
  • Ensembl(GRCz11):ENSDARG00000100114 (1)
  • ORTHOLOGY for sf3a3 (Chr: 19)
    CITATIONS (28)