ZFIN ID: ZDB-GENE-040827-1
Gene Name: intraflagellar transport 172
Gene Symbol: ift172
Sequence Ontology ID : SO:0000704

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Previous Names: moe (1), LIM-interacting protein (1)

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(Including Attributions)
Location: Chr: 20 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hi2211Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • pd1085 Point Mutation Exon 13 Splice Site ENU
    sa44947 Point Mutation Unknown Unknown ENU
    Targeting reagents:
    PHENOTYPE
    Data: 19 figures from 12 publications
    Observed in:
    DISEASE ASSOCIATED WITH ift172 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    retinitis pigmentosa 71 Retinitis pigmentosa 71 616394
    short-rib thoracic dysplasia 10 with or without polydactyly Short-rib thoracic dysplasia 10 with or without polydactyly 615630
    DISEASE ASSOCIATED WITH ift172 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process pronephros development (more)
    Cellular Component cilium (more)
    GO Terms (all 12)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001680 (1)
  • InterPro:IPR011990 (1)
  • InterPro:IPR015943 (1)
  • InterPro:IPR036322 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ift172-001 (1) 5655
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ift172 No data available
    MARKER RELATIONSHIPS
    ift172Contained in: [BAC] DKEY-221H15 (1) (order this)
    ift172Encodes: [cDNA] MGC:195072 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002312 (1) 5650bp
    Genomic GenBank:BX511178 (1) 187362bp
    Select Tool
    Polypeptide UniProtKB:B3DK94 (1) 1745aa
    Sequence Clusters UniGene:19771 (1)
    Sequence Information (all 14)
    OTHER ift172 GENE PAGES
  • Alliance (1)
  • Gene:432389 (1)
  • VEGA:OTTDARG00000006088 (1)
  • Ensembl(GRCz11):ENSDARG00000041870 (2)
  • ORTHOLOGY for ift172 (Chr: 20)
    CITATIONS (45)